Computational Non coding RNA Biology

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  • Author : Yun Zheng
  • Publisher : Academic Press
  • Pages : 320 pages
  • ISBN : 0128143665
  • Rating : /5 from reviews
CLICK HERE TO GET THIS BOOK >>>Computational Non coding RNA Biology

Download or Read online Computational Non coding RNA Biology full in PDF, ePub and kindle. this book written by Yun Zheng and published by Academic Press which was released on 14 September 2018 with total page 320 pages. We cannot guarantee that Computational Non coding RNA Biology book is available in the library, click Get Book button and read full online book in your kindle, tablet, IPAD, PC or mobile whenever and wherever You Like. Computational Non-coding RNA Biology is a resource for the computation of non-coding RNAs. The book covers computational methods for the identification and quantification of non-coding RNAs, including miRNAs, tasiRNAs, phasiRNAs, lariat originated circRNAs and back-spliced circRNAs, the identification of miRNA/siRNA targets, and the identification of mutations and editing sites in miRNAs. The book introduces basic ideas of computational methods, along with their detailed computational steps, a critical component in the development of high throughput sequencing technologies for identifying different classes of non-coding RNAs and predicting the possible functions of these molecules. Finding, quantifying, and visualizing non-coding RNAs from high throughput sequencing datasets at high volume is complex. Therefore, it is usually possible for biologists to complete all of the necessary steps for analysis. Presents a comprehensive resource of computational methods for the identification and quantification of non-coding RNAs Introduces 23 practical computational pipelines for various topics of non-coding RNAs Provides a guide to assist biologists and other researchers dealing with complex datasets Introduces basic computational methods and provides guidelines for their replication by researchers Offers a solution to researchers approaching large and complex sequencing datasets

Computational Non coding RNA Biology

Computational Non coding RNA Biology
  • Author : Yun Zheng
  • Publisher : Academic Press
  • Release : 14 September 2018
GET THIS BOOK Computational Non coding RNA Biology

Computational Non-coding RNA Biology is a resource for the computation of non-coding RNAs. The book covers computational methods for the identification and quantification of non-coding RNAs, including miRNAs, tasiRNAs, phasiRNAs, lariat originated circRNAs and back-spliced circRNAs, the identification of miRNA/siRNA targets, and the identification of mutations and editing sites in miRNAs. The book introduces basic ideas of computational methods, along with their detailed computational steps, a critical component in the development of high throughput sequencing technologies for identifying different

Computational Biology of Non Coding RNA

Computational Biology of Non Coding RNA
  • Author : Xin Lai,Shailendra K. Gupta,Julio Vera
  • Publisher : Humana Press
  • Release : 04 February 2019
GET THIS BOOK Computational Biology of Non Coding RNA

This volume details a collection of state-of-art methods including identification of novel ncRNAs and their targets, functional annotation and disease association in different biological contexts. Chapters guide readers through an overview of disease-specific ncRNAs, computational methods and workflows for ncRNA discovery, annotation based on high-throughput sequencing data, bioinformatics tools and databases for ncRNA analyses, network-based methods, and kinetic modelling of ncRNA-mediated gene regulation. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective

Long Non Coding RNAs

Long Non Coding RNAs
  • Author : Lin Zhang,Xiaowen Hu
  • Publisher : Humana
  • Release : 21 August 2021
GET THIS BOOK Long Non Coding RNAs

This second edition provides a broad spectrum of methods used in long non-coding RNAs (lncRNA) research, ranging from computational annotation of lncRNA genes to molecular and cellular analyses of the function of individual lncRNA. Chapters guide readers through studies used to circular RNAs, RNA splicing, and findings on lncRNA in human diseases. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible

The Chemical Biology of Long Noncoding RNAs

The Chemical Biology of Long Noncoding RNAs
  • Author : Stefan Jurga,Jan Barciszewski
  • Publisher : Springer
  • Release : 24 October 2020
GET THIS BOOK The Chemical Biology of Long Noncoding RNAs

This book offers a comprehensive and detailed overview of various aspects of long non-coding RNAs. It discusses their emerging significance in molecular medicine, ranging from human cancers to cardiovascular and metabolic diseases. Transcriptomic studies have demonstrated that the majority of genomes found in complex organisms are expressed in highly dynamic and cell-specific patterns, producing huge numbers of intergenic, antisense and intronic long non-protein-coding RNAs (lncRNAs). Thousands of lncRNAs have been identified, and unlike mRNA, they have no protein-coding capacity. A

Computational Methods for Genome wide Non coding RNA Discovery and Analysis

Computational Methods for Genome wide Non coding RNA Discovery and Analysis
  • Author : Shaojie Zhang
  • Publisher : Unknown
  • Release : 24 January 2022
GET THIS BOOK Computational Methods for Genome wide Non coding RNA Discovery and Analysis

The discovery of novel non-coding RNAs has been among the most exciting recent developments in Biology, yet, many more remain undiscovered. It has been hypothesized that there is in fact an abundance of functional non-coding RNAs (ncRNAs) with various catalytic and regulatory functions. Computational methods tailored specifically for ncRNA discovery are being actively developed. As the inherent signal for ncRNA is weaker than that for protein coding genes, comparative methods offer the most promising approach. In this dissertation, we address

Bioinformatics of Non Coding RNAs with Applications to Biomedicine Recent Advances and Open Challenges

Bioinformatics of Non Coding RNAs with Applications to Biomedicine  Recent Advances and Open Challenges
  • Author : Carlo Maria Croce,Alfredo Ferro,Alessandro Laganà
  • Publisher : Frontiers Media SA
  • Release : 27 January 2017
GET THIS BOOK Bioinformatics of Non Coding RNAs with Applications to Biomedicine Recent Advances and Open Challenges

The recent discovery of small and long non-coding RNAs (ncRNAs) has represented a major breakthrough in the life sciences. These molecules add a new layer of complexity to biological processes and pathways by revealing a sophisticated and dynamic interconnected system whose structure is just beginning to be uncovered. Genetic and epigenetic aberrations affecting ncRNA gene sequences and their expression have been linked to a variety of pathological conditions, including cancer, cardiovascular and neurological diseases. Latest advances in the development of

Identification and Classification of Long Non Coding RNA in Zea Mays Using Computational and Bioinformatic Approaches

Identification and Classification of Long Non Coding RNA in Zea Mays Using Computational and Bioinformatic Approaches
  • Author : Susan Boerner
  • Publisher : Unknown
  • Release : 24 January 2022
GET THIS BOOK Identification and Classification of Long Non Coding RNA in Zea Mays Using Computational and Bioinformatic Approaches

ABSTRACT: Computational analysis of cDNA sequences from multiple organisms suggests that a large portion of transcribed DNA does not code for a functional protein. As studies begin to delve into the possible functions of these noncoding transcripts, the results are revealing an ever more complex genome, where what was once dubbed "junk" is now seemingly necessary. The characterization of several long noncoding (lnc)RNAs in human and mouse has involved the analysis of raw genomic sequence data with a set

Regulatory RNAs

Regulatory RNAs
  • Author : Bibekanand Mallick,Zhumur Ghosh
  • Publisher : Springer
  • Release : 05 February 2012
GET THIS BOOK Regulatory RNAs

Recent progress in high-throughput technologies and genome wide transcriptome studies have lead to a significant scientific milestone of discovering non-coding RNAs (ncRNAs) which spans through a major portion of the genome. These RNAs most often act as riboregulators, and actively participate in the regulation of important cellular functions at the transcriptional and/or post-transcriptional levels rather than simply being an intermediated messenger between DNA and proteins. As the appreciation for the importance of ncRNAs continues to emerge, it is also

Computational Biology and Bioinformatics

Computational Biology and Bioinformatics
  • Author : Ka-Chun Wong
  • Publisher : CRC Press
  • Release : 27 April 2016
GET THIS BOOK Computational Biology and Bioinformatics

The advances in biotechnology such as the next generation sequencing technologies are occurring at breathtaking speed. Advances and breakthroughs give competitive advantages to those who are prepared. However, the driving force behind the positive competition is not only limited to the technological advancement, but also to the companion data analytical skills and computational methods which are collectively called computational biology and bioinformatics. Without them, the biotechnology-output data by itself is raw and perhaps meaningless. To raise such awareness, we have

Computational Systems Bioinformatics

Computational Systems Bioinformatics
  • Author : Peter Markstein,Ying Xu
  • Publisher : Imperial College Press
  • Release : 24 January 2022
GET THIS BOOK Computational Systems Bioinformatics

This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. There are also abstracts from the keynote addresses and invited talks. The papers cover not only theoretical aspects of bioinformatics but also delve into the application of new methods,

RNA Methodologies

RNA Methodologies
  • Author : Robert E. Farrell, Jr.
  • Publisher : Elsevier Health Sciences
  • Release : 01 May 2022
GET THIS BOOK RNA Methodologies

RNA Methodologies: A Laboratory Guide for Isolation and Characterization, Sixth Edition continues its tradition of excellence in providing the most up-to-date ribonucleic acid lab techniques for seasoned scientists and graduate students alike. This edition features new material on RNA sequencing, RNA in Situ Hybridization, non-coding RNAs, computational RNA biology, transcriptomes and bioinformatics, with the latest advances in methods and protocols across the field of RNA investigation. As a leader in the field, Dr. Farrell provides a wealth of knowledge on

Recent Progresses of Non Coding RNAs in Biological and Medical Research 2nd Edition

Recent Progresses of Non Coding RNAs in Biological and Medical Research  2nd Edition
  • Author : Yun Zheng,Philipp Kapranov
  • Publisher : Frontiers Media SA
  • Release : 04 November 2020
GET THIS BOOK Recent Progresses of Non Coding RNAs in Biological and Medical Research 2nd Edition

Publisher’s note: In this 2nd edition, the following article has been updated: Xun Y, Tang Y, Hu L, Xiao H, Long S, Gong M, Wei C, Wei K and Xiang S (2019) Purification and Identification of miRNA Target Sites in Genome Using DNA Affinity Precipitation. Front. Genet. 10:778. doi: 10.3389/fgene.2019.00778

Regulatory RNAs

Regulatory RNAs
  • Author : Bibekanand Mallick,Zhumur Ghosh
  • Publisher : Springer Science & Business Media
  • Release : 01 February 2012
GET THIS BOOK Regulatory RNAs

Recent progress in high-throughput technologies and genome wide transcriptome studies have lead to a significant scientific milestone of discovering non-coding RNAs (ncRNAs) which spans through a major portion of the genome. These RNAs most often act as riboregulators, and actively participate in the regulation of important cellular functions at the transcriptional and/or post-transcriptional levels rather than simply being an intermediated messenger between DNA and proteins. As the appreciation for the importance of ncRNAs continues to emerge, it is also

Encyclopedia of Bioinformatics and Computational Biology

Encyclopedia of Bioinformatics and Computational Biology
  • Author : Anonim
  • Publisher : Elsevier
  • Release : 21 August 2018
GET THIS BOOK Encyclopedia of Bioinformatics and Computational Biology

Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics combines elements of computer science, information technology, mathematics, statistics and biotechnology, providing the methodology and in silico solutions to mine biological data and processes. The book covers Theory, Topics and Applications, with a special focus on Integrative –omics and Systems Biology. The theoretical, methodological underpinnings of BCB, including phylogeny are covered, as are more current areas of focus, such as translational bioinformatics, cheminformatics, and environmental informatics. Finally, Applications provide guidance for